Gene Expression & Phenotype (College Board AP® Biology): Study Guide

Naomi Holyoak

Written by: Naomi Holyoak

Reviewed by: Cara Head

Updated on

Gene expression & phenotype

  • The phenotype of a cell or organism depends on which genes are expressed and at what levels

  • Although all cells in a multicellular organism contain the same DNA, different sets of genes are active in different cells

  • Active genes are transcribed into mRNA and translated into proteins, which determine the cell’s structure, function, and behaviour

  • Regulation of gene expression is central to cell differentiation and development

Cell differentiation

  • Stem cells contain the full genome, but only certain genes are expressed during differentiation

  • This selective gene expression produces proteins unique to a cell type, giving rise to specialised structures and functions

  • This is the process by which cells become specialized

    • Under certain conditions, some genes in a stem cell are activated, whilst others are inactivated

    • mRNA is transcribed from active genes only

    • This mRNA is then translated to form proteins

    • These proteins will be specific to the tissue in which the cell is found; they determine the structure of the cell and the processes that occur within it

Diagram showing cell differentiation. An undifferentiated cell expressing genes 1-4 forms daughter cells expressing various gene combinations, becoming specialised cells.
Differences in gene expression allow cells to differentiate into diferent cell types

Development

  • Development is the process by which a fertilized egg develops into a multicellular organism

  • It requires expression of the right genes, at the right time and place, and in the right sequence

  • Transcription factors coordinate this process, turning gene sets on or off in sequence

    • For example, Hox genes encode transcription factors that control body plan development

Small RNAs and regulation

  • Small RNA molecules (e.g. microRNAs, siRNAs) regulate gene expression post-transcriptionally

  • They bind to complementary mRNA sequences, leading to:

    • mRNA degradation (preventing translation)

    • blocking ribosome binding, reducing protein synthesis

  • This adds another layer of control over how much protein is produced, further influencing phenotype

Examiner Tips and Tricks

Gene regulation creates phenotypic differences between cells and organisms by controlling which proteins are made, when, and in what amounts. This underlies cell differentiation, development, and responses to the environment.

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Naomi Holyoak

Author: Naomi Holyoak

Expertise: Biology Content Creator

Naomi graduated from the University of Oxford with a degree in Biological Sciences. She has 8 years of classroom experience teaching Key Stage 3 up to A-Level biology, and is currently a tutor and A-Level examiner. Naomi especially enjoys creating resources that enable students to build a solid understanding of subject content, while also connecting their knowledge with biology’s exciting, real-world applications.

Cara Head

Reviewer: Cara Head

Expertise: Biology & Psychology Content Creator

Cara graduated from the University of Exeter in 2005 with a degree in Biological Sciences. She has fifteen years of experience teaching the Sciences at KS3 to KS5, and Psychology at A-Level. Cara has taught in a range of secondary schools across the South West of England before joining the team at SME. Cara is passionate about Biology and creating resources that bring the subject alive and deepen students' understanding