Practical Skills: Endorsement Assessment (OCR A Level Biology): Flashcards

Exam code: H420

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  • Why must care be taken when using live animals in biological experiments?

    To avoid harming them. Organisms should be observed for as short a time as possible and returned promptly and safely to their normal environment.

  • How should aquatic animals be treated during an investigation to ensure ethical use?

    They should only be observed for a short time before being promptly returned to their main container.

  • Why should microscopic aquatic animals be observed using cavity slides rather than ordinary flat slides?

    A cavity slide has a small well that holds a small amount of water, ensuring the organisms have enough water available to prevent dehydration or heat damage from the microscope light.

  • Cavity slide

    A microscope slide with a small well that holds a small amount of water, allowing microscopic aquatic organisms to be observed without dehydrating.

  • When using human participants for pulse rate and exercise studies, what must be considered?

    The type of exercise and how it will be carried out should be carefully planned in order to prevent injury.

  • Why should chemicals such as caffeine or alcohol not be administered to human participants in a school environment?

    Administering such substances is not safe or appropriate in a school setting, so they must not be given to participants.

  • Chemicals such as caffeine or alcohol should be administered to human participants in a school environment.

    Chemicals such as caffeine or alcohol should not be administered to human participants in a school environment.

  • What apparatus is commonly used to investigate the effect of abiotic factors on the movement of animals?

    Choice chambers and mazes.

  • Which model animals are typically used in these choice chamber and maze experiments?

    Woodlice and maggots.

  • Choice chamber

    A piece of apparatus divided into sections offering different conditions (e.g. humid vs dry), used to investigate how an organism responds to abiotic factors by recording where it moves.

  • In a woodlouse choice chamber humidity experiment, how are the two different humidity conditions created?

    A fixed volume of distilled water is added to one side to create high humidity, and a fixed volume of drying agent is added to the other side to create low humidity.

  • What is the purpose of the gauze platforms in a woodlouse choice chamber?

    They keep the woodlice at a safe distance from the water and drying agent, while still allowing them to move between the two sections.

  • Outline the main method for investigating the response of woodlice to humidity using a choice chamber.

    • Divide each choice chamber into two sections, adding distilled water to one side and drying agent to the other to control humidity\n\n- Insert gauze platforms to keep the woodlice a safe distance from the water and drying agent\n\n- Divide the woodlice into two even-sized groups and drop them gently into the centre of chambers kept in the dark (group A) and in the light (group B)\n\n- Record the position of the woodlice after 15 minutes and repeat several times for all conditions

  • What were the key results of the woodlouse humidity choice chamber experiment?

    • A significant percentage of woodlice moved to the humid side, helping to prevent water loss from their respiratory surfaces\n\n- The woodlice responded to humidity more actively when in the light\n\n- The woodlice tended to stop moving in humid conditions, keeping them within favourable conditions that reduce water loss

  • Why is moving to the humid side of the choice chamber a beneficial response for woodlice?

    It helps to prevent water loss from the respiratory surfaces of the woodlice, and stopping in humid conditions keeps them within favourable conditions that reduce dehydration.

  • True or False: caffeine and alcohol may be administered to human participants in a school environment.

    False — such chemicals must not be administered to participants in a school setting.

  • True or False: microscopic aquatic animals should be observed using cavity slides to stop them drying out.

    True

  • Aseptic (sterile) technique

    A set of procedures used when culturing microorganisms that prevent the microbes being investigated from escaping or becoming contaminated with other unwanted, possibly pathogenic, microbes.

  • Why are aseptic techniques essential when investigating the effect of antimicrobial substances on microbial growth?

    They ensure the microbes being investigated do not:

    • escape from the culture

    • become contaminated with another unwanted, possibly pathogenic, microbe

    This is especially important in preventing the accidental culture of human pathogens.

  • State four aseptic techniques that should be used when culturing microorganisms.

    Any four of, for example:

    • Washing hands thoroughly to disinfect them

    • Disinfecting work surfaces with disinfectant or alcohol

    • Sterilising all apparatus, glassware and collecting loops before use

    • Sterilising the culture medium (broth or agar plate)

    • Using flamed loops or sterile swabs when transferring cultures

    • Flaming culture bottlenecks to prevent contamination

    • Only removing petri dish lids when necessary

  • Why should used equipment be sterilised or disposed of promptly, and food and drink banned from the lab, when working with microbial cultures?

    To prevent contamination of the cultures and to reduce the risk of accidentally culturing or ingesting potentially pathogenic microbes, keeping both the investigation and the person safe.

  • Why should cultures not be grown at body (human) temperature in a school or college lab?

    To reduce the risk of culturing microorganisms that are pathogenic to humans, as human pathogens grow best at body temperature.

  • When transferring cultures, using loops or sterile swabs avoids collecting unwanted microbes from the atmosphere.

    When transferring cultures, using flamed loops or sterile swabs avoids collecting unwanted microbes from the atmosphere.

  • Colony-forming unit (CFU)

    A live bacterial cell that is able to divide and form a colony on an agar plate.

  • What is the disc diffusion method used to test for?

    It is used to test for antibiotic resistance in bacteria.

  • Outline the method for the disc diffusion technique to test bacterial antibiotic resistance.

    • Pre-soak paper discs in the different antibiotic solutions

    • Spread a sample of diluted bacterial broth onto the surface of a sterile agar plate

    • Lightly press the paper discs onto the agar, evenly distributed and not touching each other or the edges

    • Incubate the plate overnight at an optimum temperature for bacterial growth

    • Examine the results with the petri dish lid on

  • In the disc diffusion method, why must all the antibiotic solutions be at the same concentration?

    So that the effects of the different antibiotics can be fairly compared (it acts as a control variable).

  • In a disc diffusion experiment, what does a clear zone around a paper disc indicate?

    That the bacteria are vulnerable (susceptible) to that antibiotic.

    There are no bacteria present in the clear area, because the antibiotic has diffused outwards and killed the bacteria where its concentration is high enough.

  • How does the size of the clear zone relate to how effective an antibiotic is?

    More effective antibiotics require a lower concentration to kill the bacteria, so they produce larger clear zones.

  • State one advantage of the disc diffusion method for testing bacterial antibiotic resistance.

    It allows multiple antibiotics to be tested at once.

  • In a disc diffusion experiment, what does no clear zone around a paper disc indicate?

    That the bacteria are completely resistant to that antibiotic.

  • True or False: In a school or college lab, microbial cultures should be incubated at human body temperature to encourage the fastest growth.

    False — cultures should not be grown at body temperature, to reduce the risk of culturing microbes that are pathogenic to humans.

  • True or False: A larger clear zone around a disc in a disc diffusion test indicates a more effective antibiotic.

    True

  • Why are dissections a valuable part of scientific research?

    They allow the internal structures of organisms and organs to be examined, so that theories can be made about how they function.

  • Which gas exchange structure is exposed and studied when a fish is dissected?

    The gills (the gas exchange surface in fish).

  • Which structures of the insect gas exchange system can be exposed by dissection?

    The spiracles, tracheae and tracheoles.

  • The gas exchange surface exposed by dissecting a fish is the .

    The gas exchange surface exposed by dissecting a fish is the gills.

  • What ethical concerns surround the use of animals in dissections?

    • People worry about how the animals are raised and killed

    • It goes against the religious beliefs of some individuals

  • What good practice should be followed regarding the sourcing and disposal of a biological specimen for dissection?

    • It should come from a reputable source

    • It should be disposed of correctly

    • If multiple specimens are used, they should be from individual organisms of the same species and roughly the same age

  • Why should a lab coat, gloves and eye protection be worn during a dissection?

    To avoid contamination with biological material, which could cause an allergic reaction.

  • What safety precautions should be taken when using a scalpel during a dissection?

    • Cut away from your body

    • Keep your fingers far from the blade to reduce the chance of cutting yourself

  • When would you use scissors rather than a scalpel in a dissection, and vice versa?

    • Scissors: for cutting large sections of tissue, where cuts do not need to be precise

    • Scalpel: for finer, more precise cutting (it must be sharp to ensure this)

  • What are pins used for during a dissection?

    To move the other sections of the specimen aside, leaving the desired structure exposed.

  • Give some limitations of using dissection to study gas exchange surfaces.

    • It can be hard to see some of the smaller, finer structures within organs

    • The specimens do not reflect how the tissue would look in a living organism

    • If only a single specimen is dissected, anomalies within it may be ignored or glossed over

  • Why is it important that dissection instruments (scissors and scalpel) are sharp?

    Sharp instruments give clean, precise cuts with as little damage as possible.

    Blunt instruments are dangerous, as more force is required to cut, and they do not give precise cuts, making internal structures harder to distinguish.

  • In an exam, when suggesting a method of dissection for a particular organ, what must you do to gain the marks?

    Name the specific tools that should be used (e.g. scissors and forceps).

  • True or False: Dissection instruments such as scalpels and scissors should be kept sharp.

    True — sharp instruments give clean, precise cuts and are safer, as less force is needed.

  • True or False: Gills are the gas exchange surface found in insects.

    False — gills are found in fish; insects use spiracles, tracheae and tracheoles.

  • Spiracles

    External openings on the surface of an insect through which air enters the gas exchange system.

  • Tracheoles

    The smallest tubes of the insect gas exchange system, where gas exchange with the body tissues takes place.

  • Biological drawing

    A line picture that shows specific features observed when a specimen is viewed under a microscope (or from a photomicrograph).

  • Blood smear

    A small amount of blood spread onto a glass microscope slide, stained and covered with a coverslip, so that the different blood cells can be examined under a microscope.

  • What two pieces of information must be recorded alongside a biological drawing?

    • A title

    • The magnification under which the observations were made

  • List the conventions followed when making a biological drawing.

    • Use a sharp HB pencil (and a good eraser)

    • Draw on plain white paper

    • Use clear, single lines with no shading

    • Make the drawing as large as the space allows

    • Only draw well-defined structures

    • Use proper proportions

  • What are the rules for drawing label lines on a biological drawing?

    • They should not cross or have arrowheads

    • They should connect directly to the part being labelled

    • They should be kept to one side, parallel to the top of the page

    • They should be drawn with a ruler

  • Why should you use clear, single lines with no shading in a biological drawing?

    So that the drawing clearly shows the specific features and proper proportions of the structures observed, rather than obscuring them with thick shading.

  • What is the difference between a cell drawing and a plan drawing?

    Cell drawings are typically made when viewing cells at higher magnification.

    Plan drawings are made of tissues viewed at lower magnification and never show individual cells.

  • How can red blood cells be identified in a blood smear?

    They have no nucleus and a distinct biconcave shape.

  • How do white blood cells differ in appearance from red blood cells in a blood smear?

    White blood cells have irregular shapes and possess a nucleus, whereas red blood cells have a regular biconcave shape and no nucleus.

  • What distinctive feature identifies a neutrophil in a blood smear?

    A distinctive lobed nucleus. Neutrophils make up roughly 70% of all white blood cells.

  • Lymphocytes can be identified by their very nuclei, which nearly occupy the entire cell.

    Lymphocytes can be identified by their very large nuclei, which nearly occupy the entire cell.

  • have distinctive lobed nuclei and make up roughly 70% of all white blood cells.

    Neutrophils have distinctive lobed nuclei and make up roughly 70% of all white blood cells.

  • When producing a biological drawing, what key principle should guide what you draw?

    Only ever draw what you actually see, not what you think you see.

  • What piece of equipment helps you accurately reflect the size and proportions of structures seen under the microscope?

    The eyepiece graticule.

  • True or False: In a plan drawing, individual cells are never drawn.

    True

  • True or False: Red blood cells have a nucleus.

    False — red blood cells have no nucleus and a distinct biconcave shape.

  • True or False: Label lines on a biological drawing should have arrowheads.

    False — label lines should have no arrowheads and should not cross.

  • Sampling

    A method of investigating the abundance and distribution of species and populations within a habitat.

  • What is the difference between random and non-random sampling?

    • Random sampling: the positions of the sampling points are completely random / due to chance

    • Non-random sampling: the positions of the sampling points are deliberately chosen by the person carrying out the sampling

  • Name three pieces of equipment (other than quadrats) that can be used for sampling in fieldwork.

    Any three of:

    • Sweeping nets

    • Pitfall traps

    • Pooters

    • Tullgren funnel

  • Describe how a random number generator is used to choose sample sites in the quadrat method.

    • Mark up a grid on a map or to-scale drawing of the area and label the grid with coordinates

    • Use a random number generator to choose a set of coordinates

    • Place a quadrat at each generated coordinate

  • Why is a random number generator used to select sampling coordinates?

    To avoid sampling bias, which could lead to over- or under-estimation (e.g. subconsciously choosing areas that are easier to access or that look like they contain more individuals).

  • To determine the number of quadrats required for a representative sample, a is calculated and quadrats are added until there is no further significant change in its value.

    To determine the number of quadrats required for a representative sample, a running mean is calculated and quadrats are added until there is no further significant change in its value.

  • How is the estimated population size for a whole area calculated from quadrat data?

    Divide the whole area by the area of one quadrat, then multiply this value by the mean number of individuals per quadrat.

  • How is percentage cover measured using a grid quadrat?

    • Use a grid quadrat split into 100 smaller squares, where each square = 1% cover

    • Count the number of squares in which the species occupies over half the square (e.g. 30 squares = 30% cover)

  • What type of organism is percentage cover usually used to measure the abundance of?

    Usually used for plants.

  • Why should the same person estimate percentage cover for all samples?

    Estimating percentage cover is subjective, so using the same person for all samples controls this variable and keeps estimates consistent.

  • Species frequency

    The probability that a species will be found within any quadrat in the sample area. Calculated as: (number of quadrats the species was present in ÷ total number of quadrats) × 100.

  • What does it suggest if a species has a high mean percentage cover but a low frequency?

    It suggests the species lives in groups/clumps in preferred areas of the habitat, rather than being evenly distributed. Percentage cover and frequency used together give a good picture of a species' distribution.

  • Why can quadrats and transects only be used for certain species?

    They can only be used for sessile and immobile species (e.g. plants and slow-moving animals). Motile animals move and cannot be reliably counted this way, so a different method (mark-release-capture) is needed.

  • Describe the mark-release-capture method for estimating the population size of a mobile species.

    • Take a first large sample; catch, count and mark individuals in a way that won't affect survival

    • Return marked individuals to the habitat and allow them to mix with the population

    • After sufficient time, capture a second large sample

    • Count the marked and unmarked individuals, and use the proportion of marked to unmarked to estimate the population size

  • State the mark-release-capture (Lincoln index) formula and define each term.

    N = (n₁ × n₂) ÷ m₂

    • N = population estimate

    • n₁ = number of marked individuals released

    • n₂ = number of individuals in the second sample (marked and unmarked)

    • m₂ = number of marked individuals in the second sample

  • State the assumptions made when using the mark-release-capture method.

    • Marked individuals have sufficient time to disperse and mix back into the main population

    • Marking does not affect the survival rate of individuals (e.g. does not increase predation)

    • The marking remains visible and does not rub off

    • The population size stays constant during the study (no significant births, deaths or migration)

  • True or False: Quadrats and transects can be used to estimate the population size of fast-moving animals.

    False — quadrats and transects can only be used for sessile and immobile species; mobile animals require the mark-release-capture method.

  • True or False: A running mean is used to determine how many quadrats are needed for a representative sample.

    True

  • Data logger

    A tool that allows for the quick and efficient gathering of data, either for simple data collection (e.g. breathing rate) or for more complex data collection using a number of probes monitoring different variables attached to a main computer.

  • Once data from a data logger has been inputted into a computer, what can the computer do with it?

    The information can be formatted into a table, and the computer is then able to:\n\n- Calculate the mean\n\n- Perform statistical tests\n\n- Plot graphs using the data

  • Information from a data logger can be inputted into a computer and formatted into a .

    Information from a data logger can be inputted into a computer and formatted into a table.

  • Give examples of processes whose theoretical impact on populations can be studied using computer modelling.

    • Ecological succession / zonation\n\n- Infectious disease transmission / epidemiology\n\n- Predator-prey relationships\n\n- Natural selection\n\n- Genetic drift

  • What is a key benefit of using computer programs to model changes in populations and environments?

    Time can be sped up to predict the future outcome of populations and environments, allowing changes that would normally take very long time periods and many generations to be modelled over much shorter, more experimentally appropriate timescales.

  • How is a computer program typically set up to model the effects of natural selection?

    The program usually starts off with a simple simulated population, with no particular selection pressures acting upon it. Natural selection can then be investigated by changing various factors and observing the effects on the simulated population.

  • Give examples of factors that can be changed when using a computer program to model natural selection.

    • The presence or absence of different biotic and abiotic selection pressures (e.g. predators, disease, food availability)\n\n- Making new, specifically selected mutations appear in the population\n\n- Changing the likelihood that a new mutation will appear\n\n- Switching which alleles are dominant and which are recessive\n\n- Changing the environment the species is in\n\n- Changing one or more of the adaptations of the species

  • When modelling natural selection, what does the program calculate once factors have been changed?

    The effects of the changing factors are modelled, and the probabilities of different outcomes for the simulated population can be calculated.

  • Genetic drift

    A gradual change in allele frequencies in a small population due to chance and not natural selection. When a population is significantly small, chance can affect which alleles get passed onto the next generation, so over time some alleles can be lost or favoured purely by chance.

  • Why does chance have a greater effect on allele frequencies in small populations?

    When a population is significantly small, chance can affect which alleles get passed onto the next generation, so over time some alleles can be lost or favoured purely by chance.

  • A gradual change in allele frequencies in a small population due to chance, and not natural selection, is called .

    A gradual change in allele frequencies in a small population due to chance, and not natural selection, is called genetic drift.

  • How can genetic drift be studied?

    Computer programs similar to those used to model natural selection can be used to model genetic drift.

  • True or False: A data logger allows for the quick and efficient gathering of data.

    True

  • True or False: Genetic drift is a change in allele frequencies caused by natural selection.

    False — genetic drift is caused by chance, not natural selection.

  • Which variable is investigated in the agar diffusion practical?

    The surface area to volume ratio of the agar cubes.

  • Outline how the effect of surface area to volume ratio on the rate of diffusion is investigated using agar.

    • Cut coloured agar into cubes of different sizes (e.g. 0.5 cm, 1 cm and 2 cm cubes)\n\n- Place each cube into a boiling tube containing a diffusion solution (e.g. dilute hydrochloric acid)\n\n- Time the diffusion of the acid into the cubes (shown by the indicator changing colour)\n\n- Calculate the rate of diffusion and compare it with the surface area to volume ratio of each cube

  • How can the coloured agar used in the diffusion practical be prepared?

    The agar can be made up with Universal Indicator only, or with very dilute sodium hydroxide solution and Universal Indicator to create purple agar.

  • Why must the hydrochloric acid have a higher molarity than the sodium hydroxide in the agar?

    So that the acid's diffusion into the agar can be monitored by a change in colour of the indicator in the agar blocks.

  • What are the two measurements that can be taken to follow the rate of diffusion in the agar practical?

    • The time taken for the acid to completely change the colour of the indicator in the agar blocks (measured with a stopwatch)\n\n- The distance travelled into the block by the acid in a given time period, e.g. 5 minutes (measured with a microscope and stage micrometer)

  • Which apparatus is used to measure the distance the acid travels into an agar block?

    A microscope and a stage micrometer (essentially a mini ruler).

  • How is the time taken for complete colour change converted into a rate of diffusion?

    Rate of diffusion = 1 ÷ time taken

  • What graph could be drawn to present the results of the agar diffusion practical?

    A graph showing how the rate of diffusion (rate of colour change) changes with the surface area to volume ratio of the agar cubes.

  • Explain why a larger agar cube has a slower rate of diffusion than a smaller one.

    As a cube increases in size, its volume increases faster than its surface area (volume is cubed, surface area is squared).\n\nThis gives a larger cube a smaller surface area to volume ratio, so diffusion into the centre takes longer and is less effective.

  • Which pieces of apparatus should be used to record mass, time and volume accurately in a quantitative practical?

    • Mass — a digital balance\n\n- Time — a digital stopwatch\n\n- Volume — a measuring cylinder

  • Which apparatus should be used to record temperature and length accurately in a quantitative practical?

    • Temperature — a digital thermometer (though water baths have one built in)\n\n- Length — a ruler

  • The greater the surface area to volume ratio of an agar cube, the the rate of diffusion.

    The greater the surface area to volume ratio of an agar cube, the faster the rate of diffusion.

  • In the agar practical, the acid completely changing the colour of the shows that diffusion has taken place.

    In the agar practical, the acid completely changing the colour of the indicator shows that diffusion has taken place.

  • Surface area to volume ratio

    The total surface area of an object divided by its volume; as an object gets larger this ratio decreases.

  • Diffusion

    The net movement of particles from a region of higher concentration to a region of lower concentration.

  • True or False: A larger agar cube has a greater surface area to volume ratio than a smaller cube.

    False — a larger cube has a smaller surface area to volume ratio.

  • True or False: In the agar practical, the hydrochloric acid must have a higher molarity than the sodium hydroxide.

    True

  • What is the aim of the potato cylinder osmosis practical?

    To investigate the effects of immersing plant tissue in solutions of different water potentials, and to use the results to estimate the water potential of the plant tissue itself.

  • Outline the method for investigating water potential using potato cylinders.

    • Cut potato cylinders to the same length (one or more per solution)

    • Blot dry, then measure and record the initial mass of each

    • Place each cylinder into a sucrose solution of a different concentration (at least 5 concentrations), leaving them for a set time (e.g. 30 minutes)

    • Remove, dry to remove excess liquid, then measure and record the final length and mass

  • How is the percentage change in mass of a potato cylinder calculated?

    Percentage change in mass = (change in mass ÷ initial mass) × 100

  • A positive percentage change in mass indicates the solution had a water potential than the potato.

    A positive percentage change in mass indicates the solution had a higher water potential than the potato.

  • What does a positive percentage change in mass of a potato cylinder tell you?

    The potato has gained water by osmosis (net movement of water from the solution into the potato), so the solution had a higher water potential than the potato. The cells become turgid.

  • Why does the potato cylinder in the strongest sucrose concentration decrease in mass the most?

    There is the greatest concentration gradient between the potato cells (higher water potential) and the sucrose solution (lower water potential), so the most water molecules move out of the cells by osmosis. The cells become flaccid, and may become plasmolysed.

  • What does it mean if a potato cylinder shows no overall change in mass?

    The solution had the same water potential as the solution in the cytoplasm of the potato cells, so there was no concentration gradient and no net movement of water into or out of the cells.

  • How can the concentration of sucrose inside the potato cylinders be found from a results graph?

    Plot percentage change in mass against sucrose concentration. The point where the line of best fit crosses the x-axis (zero percentage change) gives the sucrose concentration inside the potato cylinders.

  • Turgid

    A plant cell that has taken in water by osmosis so that the water exerts turgor (hydrostatic) pressure on the cell wall, making the cell firm.

  • Plasmolysis

    When a plant cell loses so much water by osmosis that the protoplast (cell membrane and its contents) shrinks and pulls away from the cell wall.

  • Describe how a plant cell becomes plasmolysed when placed in a solution of lower water potential.

    • Water leaves the cell through the partially permeable cell surface membrane by osmosis

    • As water leaves the vacuole, the volume of the cell decreases

    • The protoplast shrinks and stops exerting pressure on the cell wall

    • The protoplast pulls away from the cell wall — the cell is plasmolysed

  • Outline the method for investigating water potential using onion (epidermal) cells.

    • Prepare epidermal strips (e.g. from red onion, which has coloured sap to make observations easier)

    • Place the strips in a range of sucrose or sodium chloride solutions of gradually decreasing water potential

    • View under a light microscope and count the number or percentage of cells that have undergone plasmolysis (may take several minutes)

  • Coloured-sap plants such as red onion are used because they make observations of easier under the microscope.

    Coloured-sap plants such as red onion are used because they make observations of plasmolysis easier under the microscope.

  • True or False: A negative percentage change in mass means the surrounding solution had a higher water potential than the potato.

    False — a negative change means the solution had a lower water potential, so water left the potato by osmosis and the cells became flaccid.

  • True or False: If a potato cylinder shows no overall change in mass, the surrounding solution had the same water potential as the potato cells.

    True

  • Which two factors are commonly investigated for their effect on cell membrane permeability?

    • Temperature

    • Solvent concentration

  • Why is beetroot used to investigate membrane permeability?

    Beetroot cells contain a dark purple-red pigment.

    The higher the membrane permeability, the more of this pigment leaks out of the cell into the surrounding water.

  • Colorimeter

    A machine that passes light through a coloured liquid sample and measures how much light is absorbed, indicating how much colour (pigment) is present in the solution.

  • Cuvette

    The small cuboid container that holds the liquid sample to be measured in a colorimeter.

  • What is the purpose of the colour filter in a colorimeter?

    It ensures the correct wavelength of light is used to measure the optical density of the specific pigment (e.g. the beetroot pigment betalain).

  • How is a colorimeter zeroed?

    Using a cuvette containing distilled water, before each sample is inserted.

  • Why must the beetroot cubes be cut to equal dimensions and checked with a digital balance?

    So they all have equal surface areas, volumes and mass.

    Otherwise these factors could affect the rate at which pigment leaks out, making the comparison unfair.

  • Why are the beetroot pieces rinsed before being placed in the test tubes?

    To remove any pigment released during cutting, which would otherwise affect the results.

  • Outline the method for investigating the effect of temperature on beetroot membrane permeability.

    • Cut five equal-sized cubes of beetroot and rinse them

    • Add each to a test tube containing the same volume of water

    • Place each test tube in a water bath at a different temperature for the same length of time (e.g. ~30 minutes)

    • Remove the beetroot pieces, leaving just the coloured liquid

    • Use a colorimeter to measure the absorbance of each sample

  • How do the colorimeter results indicate membrane permeability?

    The higher the absorbance, the more pigment has been released, due to a greater membrane permeability.

  • As temperature increases, the phospholipids in the membrane gain more energy and move more, so they become , increasing the permeability of the membrane.

    As temperature increases, the phospholipids in the membrane gain more energy and move more, so they become less tightly packed, increasing the permeability of the membrane.

  • Explain why membrane permeability increases as temperature rises.

    • Phospholipids gain more energy and become less tightly packed

    • At high temperatures the phospholipid bilayer may melt and break down

    • Water inside the cells expands, putting pressure on the membrane and deforming channel and carrier proteins

    • High temperatures break intermolecular forces in proteins, changing their conformation and function

  • Why can membrane permeability also increase at temperatures below 0°C (once thawed)?

    • Channel or carrier proteins can deform at these low temperatures

    • Ice crystals that form can pierce the cell membrane, making it highly permeable

  • Give one limitation of using cuvettes in this practical and a suitable solution.

    Cuvettes may vary slightly in thickness, or be scratched, so they absorb slightly more light.

    Solution: use the same cuvette for every reading, or repeat many times and find a mean.

  • Why must a colorimeter be zeroed before each sample?

    So that only the pigment in the sample is measured, not the water or the cuvette.

  • True or False: A higher absorbance reading indicates that less pigment has leaked from the beetroot cells.

    False — a higher absorbance indicates more pigment has leaked, showing greater membrane permeability.

  • True or False: As temperature increases, the permeability of the cell membrane increases.

    True

  • How can Benedict's solution be used to investigate the concentration of reducing sugar in a sample?

    It can be used to carry out a semi-quantitative test, in which the colour change is used to estimate the concentration of reducing sugar present in the solution.

  • Semi-quantitative test

    A test that gives an estimate of concentration (rather than an exact value), typically by comparing an observed colour change against a set of known standards.

  • Why must an excess of Benedict's solution be used in a semi-quantitative test for reducing sugar?

    So that there is more than enough copper(II) sulfate present to react with any reducing sugar in the sample, ensuring the colour change reflects the amount of sugar and not a shortage of Benedict's solution.

  • How does the colour change in a Benedict's test relate to the concentration of reducing sugar?

    The intensity of the colour change relates to the concentration of reducing sugar present. A positive test is shown along a spectrum of colour:\n\n- Green = low concentration\n\n- Brick-red = high concentration

  • A positive semi-quantitative Benedict's test is shown along a spectrum of colour, from green (low concentration) to (high concentration of reducing sugar).

    A positive semi-quantitative Benedict's test is shown along a spectrum of colour, from green (low concentration) to brick-red (high concentration of reducing sugar).

  • How are the standard solutions prepared for a semi-quantitative Benedict's test?

    Set up standard solutions with known concentrations of a reducing sugar (such as glucose), produced by carrying out a serial dilution of an existing stock solution.

  • Serial dilution

    A series of dilutions made from a stock solution, in which the concentration decreases by the same quantity between each test tube.

  • What are the two ways in which a serial dilution can be set up?

    • Doubling dilutions, where the concentration is halved between each test tube\n\n- A desired range of concentrations (e.g. 0, 2, 4, 6, 8, 10 mmol dm⁻³)

  • Once the standard solutions are prepared, describe the procedure for a semi-quantitative Benedict's test.

    • Add the same volume of (excess) Benedict's solution to each sample\n\n- Heat all tubes in a boiled water bath, ideally at the same temperature each time\n\n- Leave for a set time (around 5 minutes) to allow the colour changes to occur\n\n- Record the colour change for each known concentration

  • How is the concentration of reducing sugar in an unknown sample estimated using standard solutions?

    The same procedure is carried out on the sample of unknown concentration, and its colour is compared to the standard solution colours to estimate the concentration of reducing sugar present.

  • Colorimeter

    An instrument that beams a specific wavelength (colour) of light through a sample and measures how much of that light is absorbed (in arbitrary units), providing a quantitative measurement.

  • Why is a contrasting colour filter used when taking colorimeter readings?

    A filter is chosen so that a contrasting colour of light is shone through the sample, as this will be absorbed rather than reflected (e.g. shine green light through a red sample).\n\nThis is because a sample looks red as that wavelength is being reflected, while the other wavelengths are absorbed.

  • How is a colorimeter calibrated before taking measurements?

    • Place a blank into the colorimeter and take a reference reading\n\n- It should read 0 (no light being absorbed)\n\n- Repeat this step periodically while taking measurements to check the reading is still 0

  • How is a colorimeter used to determine the concentration of reducing sugar in an unknown sample?

    • Measure the absorbance of the known concentrations and plot a calibration (standard) curve of absorbance against concentration\n\n- Measure the absorbance of the unknown sample\n\n- Read the unknown concentration off the calibration curve

  • True or False: An excess of Benedict's solution must be used in a semi-quantitative reducing sugar test.

    True — this ensures there is more than enough copper(II) sulfate to react with all the reducing sugar present.

  • True or False: A colorimeter gives only a qualitative measure of colour.

    False — a colorimeter provides a quantitative measurement of how much light is absorbed by the sample.

  • Qualitative reagent

    A reagent that determines whether or not a substance is present in a sample, without indicating its quantity or concentration.

  • Which reagent is used to test for the presence of lipids?

    Ethanol (used in the emulsion test).

  • Which reagent is used to identify proteins?

    Biuret reagent.

  • Which reagents are used to identify carbohydrates?

    Benedict's solution and iodine.

  • Why do lipids dissolve in ethanol but not in water?

    Lipids are nonpolar molecules, so they do not dissolve in water but will dissolve in organic solvents such as ethanol.

  • What is the emulsion test used for?

    To determine, quickly and easily in a lab, whether a sample contains lipids.

  • Describe the method for carrying out the emulsion test for lipids.

    • Add ethanol to the sample to be tested\n\n- Shake the mixture to mix\n\n- Add the mixture to a test tube of water

  • What is the positive result of the emulsion test for lipids?

    A milky emulsion forms (the solution appears 'cloudy').\n\nThe more lipid present, the more obvious the milky colour of the solution.

  • What result would the emulsion test give if no lipid is present in the sample?

    The solution remains clear (no milky emulsion forms).

  • In the emulsion test, a positive result is shown by the formation of a milky .

    In the emulsion test, a positive result is shown by the formation of a milky emulsion.

  • What is the main limitation of the emulsion test for lipids?

    It is a qualitative test - it shows whether lipid is present but does not give a quantitative value for how much lipid is in the sample.

  • Lipids are molecules, so they do not dissolve in water but do dissolve in ethanol.

    Lipids are nonpolar molecules, so they do not dissolve in water but do dissolve in ethanol.

  • True or False: The emulsion test gives a quantitative measure of how much lipid is present in a sample.

    False — it is a qualitative test that only shows whether lipid is present, not how much.

  • True or False: Lipids dissolve more readily in water than in ethanol.

    False — lipids are nonpolar, so they dissolve in ethanol but not in water.

  • Emulsion

    A cloudy mixture of tiny lipid droplets suspended in water, giving the milky appearance seen in a positive lipid test.

  • Which biochemical test is used to determine whether a sample contains protein?

    The Biuret test.

  • Biuret reagent

    A reagent containing an alkali (e.g. sodium hydroxide) and copper (II) sulfate, which reacts in the presence of peptide bonds to test for protein.

  • What two chemical components make up Biuret reagent?

    • An alkali (e.g. sodium hydroxide)

    • Copper (II) sulfate solution

  • Which chemical group must be present in a sample for the Biuret test to give a positive result?

    Peptide bonds (the reagent reacts in the presence of peptide bonds).

  • Describe the method for carrying out the Biuret test on a food solution.

    • Add sodium hydroxide to the food solution to make it alkaline

    • Add a few drops of copper (II) sulfate solution (which is blue) to the sample

    • Repeat using a control solution (containing no protein)

    • Compare the colours of the control and the food sample

  • What colour change indicates a positive result in the Biuret test?

    A colour change from blue to lilac/mauve indicates protein is present.

  • In the Biuret test, if no colour change is observed and the solution remains blue, then is present.

    In the Biuret test, if no colour change is observed and the solution remains blue, then no protein is present.

  • Why must a sample contain at least two peptide bonds to give a positive Biuret result?

    The reagent reacts with peptide bonds, so samples containing only amino acids or dipeptides (which lack two or more peptide bonds) give a negative result.

  • Why is it wise to hold the test tubes against a white tile when observing the Biuret test?

    The colour change can be very subtle, so a white tile background makes it easier to detect the change from blue to lilac/mauve.

  • Why is a control solution used in the Biuret test?

    A control solution containing no protein (e.g. distilled water) provides a reference colour to compare against the food sample, making any colour change easier to identify.

  • Explain why the Biuret test is described as qualitative rather than quantitative.

    It only indicates whether protein is present or absent (via a colour change); it does not give a numerical value for the amount of protein in the sample.

  • Qualitative test

    A test that shows whether a substance is present or absent but does not measure how much of it is present.

  • True or False: The Biuret test gives a quantitative measure of how much protein is present in a sample.

    False — it is a qualitative test that only shows whether protein is present or absent.

  • True or False: A sample containing only amino acids or dipeptides will give a positive Biuret result.

    False — at least two peptide bonds must be present, so amino acids and dipeptides give a negative result.

  • Chromatography

    A technique used to separate a mixture into its individual components, relying on differences in solubility between the solutes in the mixture.

  • What are the two phases used in all chromatography techniques?

    • The mobile phase

    • The stationary phase

  • How does chromatography separate the components of a mixture?

    The components separate as the mobile phase travels over the stationary phase.

    Differences in the solubility of each component affect how far it travels.

    Components with higher solubility travel further, as they spend more time in the mobile phase.

  • In paper chromatography, what are the mobile phase and the stationary phase?

    • Mobile phase: the solvent (a liquid, e.g. water or ethanol) in which the sample molecules move

    • Stationary phase: the chromatography paper

  • Describe the method for separating a mixture using paper chromatography.

    • Place a spot of the mixture on the chromatography paper and leave it to dry

    • Suspend the paper in a solvent

    • As the solvent travels up, the components move at different speeds (larger molecules move slower)

    • The mixture separates into spots or bands, producing a chromatogram

  • Chromatogram

    The pattern of separated spots or bands produced on the chromatography paper after a mixture has been separated.

  • During paper chromatography, larger molecules move than smaller ones.

    During paper chromatography, larger molecules move slower than smaller ones.

  • Why do mixtures of colourless molecules (e.g. monosaccharides) have to be treated before chromatography?

    Colourless mixtures must be stained first so the spots can be seen.

    Coloured mixtures such as ink or chlorophyll do not need staining.

  • On what two properties do different amino acids separate during paper chromatography?

    Each amino acid is more or less soluble in the mobile phase than the others, so they separate depending on their:

    • Charge

    • Size

  • How can the separated spots of colourless amino acids be made visible on a chromatogram?

    Dry the chromatography paper and then spray it with ninhydrin solution.

    Ninhydrin reacts with amino acids to produce an easily visible blue-violet colour.

  • Solvent front

    The line drawn across the chromatogram to show how far the solvent travelled. The distance from the origin line (where samples were placed) to the solvent front is the distance moved by the solvent.

  • State the equation used to calculate the retardation factor (Rf) value.

    Rf = distance moved by solute ÷ distance moved by solvent

    The Rf value is a ratio, so it is always lower than one and has no units.

  • What does a smaller Rf value indicate about a molecule?

    A smaller Rf value indicates the molecule is less soluble and larger in size (it has travelled a shorter distance during the mobile phase).

  • How can Rf values be used to identify chloroplast pigments?

    Each pigment has a unique Rf value, so pigments extracted from a leaf can be separated and identified by comparing their Rf values to known values.

  • How are the components of a separated mixture identified on a chromatogram?

    Place known standard solutions beside the sample, then compare and match the spots.

    If a sample spot is the same distance from the origin line as a standard, the mixture must contain that substance.

  • How do the Rf values of the main chloroplast pigments generally compare?

    • Carotenoids have the highest Rf values (close to 1)

    • Chlorophyll A has an intermediate Rf value

    • Chlorophyll B has a much lower Rf value

  • True or False: Components with a higher solubility in the mobile phase travel further up the chromatography paper.

    True

  • True or False: An Rf value can be greater than one.

    False — the Rf value is a ratio, so it is always lower than one.

  • Serial dilution

    A series of dilutions of a stock solution in which the concentration decreases by the same quantity between each successive test tube.

  • How is a serial dilution created?

    By taking a series of dilutions of a stock solution, so that the concentration decreases by the same quantity between each test tube.

  • What are the two main types of serial dilution?

    • Doubling dilutions – the concentration is halved between each test tube\n\n- A desired range of concentrations (e.g. 0, 2, 4, 6, 8, 10 mmol dm⁻³)

  • Doubling dilution

    A type of serial dilution in which the concentration is halved between each successive test tube.

  • Why are serial dilutions carried out?

    To create a standard (a known range of concentrations) against which unknown concentrations can be compared.

  • Serial dilutions are completed to create a to compare unknown concentrations against.

    Serial dilutions are completed to create a standard to compare unknown concentrations against.

  • What are the three ways the comparison against a serial dilution standard can be made?

    • Visual comparison\n\n- Measured using a calibration/standard curve\n\n- Measured using a colourimeter

  • Give two situations in which serial dilutions can be used.

    • Counting bacteria or yeast populations\n\n- Determining unknown glucose, starch or protein concentrations

  • In a doubling dilution, the concentration is between each successive test tube.

    In a doubling dilution, the concentration is halved between each successive test tube.

  • True or False: In a serial dilution, the concentration decreases by a different amount between each successive test tube.

    False — the concentration decreases by the same quantity between each test tube.

  • True or False: A colourimeter can be used to measure how an unknown concentration compares against a serial dilution standard.

    True

  • Potometer

    A piece of apparatus used to investigate the effect of environmental factors on the rate of transpiration (by measuring water uptake by a plant shoot).

  • Which four environmental factors affect the rate of transpiration?

    • Air movement (airflow)

    • Humidity

    • Temperature

    • Light intensity

  • When setting up a potometer, why is the plant shoot cut underwater?

    To prevent air from entering the xylem.

  • Why must the potometer apparatus be made airtight (e.g. by sealing gaps with Vaseline)?

    If air enters the apparatus, the readings will be affected, so the results will be inaccurate.

  • Why are the leaves of the shoot dried before starting the investigation?

    Any moisture on the leaves will affect the rate of transpiration.

  • After setting up the environmental factor being investigated, the plant is left to adapt to the new environment for before readings are taken.

    After setting up the environmental factor being investigated, the plant is left to adapt to the new environment for 5 minutes before readings are taken.

  • How is the movement of the air bubble used to measure the rate of transpiration in a potometer?

    The starting and end locations of the bubble are recorded over a set time period.

    The further the bubble travels in the same time, the faster transpiration is occurring, and vice versa.

  • Outline the key steps to set up and take a reading with a potometer.

    • Cut a shoot underwater and place it in the tube

    • Set up the apparatus, sealing any gaps with Vaseline to make it airtight

    • Dry the leaves of the shoot

    • Introduce a single air bubble into the capillary tube

    • Set up the environmental factor and allow the plant to adapt for 5 minutes

    • Record the starting location of the air bubble

    • Leave for a set time, then record the end location of the bubble

  • How could you investigate the effect of airflow on the rate of transpiration using a potometer?

    Set up a fan or hairdryer directed at the plant to increase airflow.

  • How could you investigate the effect of humidity on the rate of transpiration using a potometer?

    Spray water inside a plastic bag and wrap it around the plant to increase humidity.

  • How could you investigate the effect of light intensity on the rate of transpiration using a potometer?

    Change the distance of a light source from the plant.

  • How could you investigate the effect of temperature on the rate of transpiration using a potometer?

    Change the temperature of the room the plant is in (e.g. a cold or warm room).

  • When investigating one environmental factor's effect on transpiration, how do you ensure it is a fair test?

    Keep all other factors the same, changing only the one factor being investigated.

  • True or False: The rate of transpiration increases when humidity is high.

    False — high humidity decreases the rate of transpiration.

  • True or False: A single air bubble is introduced into the capillary tube of a potometer to track water uptake.

    True

  • Why are optical (light) microscopes such a valuable tool for biologists?

    Many biological structures are too small to be seen with the naked eye.

    Optical microscopes allow tissues, cells and organelles to be seen and studied — for example, the movement of chromosomes during mitosis can be observed.

  • How does an optical microscope produce a magnified image of a specimen?

    • Light is directed through a thin layer of biological material supported on a glass slide

    • The light is focused through several lenses so that an image is visible through the eyepiece

    • Magnifying power is increased by rotating a higher power objective lens into place

  • Name the key components of an optical microscope.

    • The eyepiece lens

    • The objective lenses

    • The stage

    • The light source

    • The coarse and fine focus

  • How would you prepare a slide using a liquid specimen?

    • Add a few drops of the sample to the slide using a pipette

    • Cover the liquid/smear with a coverslip and gently press down to remove air bubbles

    • Wear gloves to ensure there is no cross-contamination of foreign cells

  • How would you prepare a slide using a solid tissue specimen?

    • Use scissors to cut a small sample of the tissue

    • Peel away or cut a very thin layer of cells (using a scalpel or forceps) to place on the slide

    • A stain may be needed to make the structures visible

    • Gently place a coverslip on top and press down to remove air bubbles

  • Why should you always begin viewing a specimen with the low power objective lens?

    • It is easier to find what you are looking for in the field of view

    • It helps prevent damage to the lens or coverslip in case the stage has been raised too high

  • Why might a thin specimen layer be damaged during viewing?

    Thin layers of material placed on slides can dry up rapidly, damaging the cells through dehydration.

  • Give possible reasons why an image viewed under an optical microscope may be unclear or blurry.

    • The focus is off — switch to the lower power objective lens and use the coarse focus

    • The specimen may not be thin enough for light to pass through

    • There could be cross-contamination with foreign cells or bodies

  • Eyepiece graticule

    An internal ruler within the eyepiece of a microscope, consisting of a series of evenly spaced vertical lines, used to measure the size of an object being viewed.

  • Stage micrometer

    A slide with an accurate scale in micrometres (µm), used to calibrate the eyepiece graticule. The smallest subdivisions typically measure 0.01 mm (10 µm).

  • Why must a microscope be calibrated before it can be used to measure the actual size of an object?

    The eyepiece graticule scale measures differently depending on the objective lens magnification used, and there are small differences between microscopes.

    Calibrating the graticule against a stage micrometer (a scale of known size) works out the actual length of each graticule division at a specific magnification, so the graticule can then be used to measure the object.

  • How do you calibrate an eyepiece graticule using a stage micrometer?

    • Line up the eyepiece graticule with the stage micrometer scale

    • Count how many graticule divisions correspond to one micrometer division of known size

    • Divide to find the length of one graticule division at that magnification

  • Cell structures are 3D, but when tissue samples are they may appear inconsistent in size on a 2D slide.

    Cell structures are 3D, but when tissue samples are cut at different planes they may appear inconsistent in size on a 2D slide.

  • State the limitations of using an optical microscope to study cells and tissues.

    • Structures are 3D but samples are cut at different planes, giving inconsistent sizes on a 2D slide

    • Optical microscopes have lower magnifying power than other microscopes, so some structures cannot be seen

    • Slide preparation could alter the structure of cells

  • Once the eyepiece graticule has been calibrated, how do you measure the size of an object?

    • Replace the micrometer with the specimen slide at the same magnification

    • Count the graticule divisions spanned by the object

    • Multiply the number of divisions by the length of one division to give the object's actual size

  • True or False: You should always begin viewing a specimen using the high power objective lens.

    False — always start with the low power objective lens, as it is easier to find the specimen and helps prevent damage to the lens or coverslip.

  • True or False: The smallest subdivisions on a typical stage micrometer measure 0.01 mm (10 µm).

    True

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